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From: "Darrick J. Wong" <djwong@kernel.org>
To: djwong@kernel.org
Cc: Kent Overstreet <kent.overstreet@linux.dev>,
	Dave Chinner <dchinner@redhat.com>,
	linux-xfs@vger.kernel.org, willy@infradead.org,
	linux-fsdevel@vger.kernel.org
Subject: [PATCH 3/7] xfs: convert xfarray insertion sort to heapsort using scratchpad memory
Date: Thu, 27 Jul 2023 15:26:06 -0700	[thread overview]
Message-ID: <169049623614.921478.3633915582455085701.stgit@frogsfrogsfrogs> (raw)
In-Reply-To: <169049623563.921478.13811535720302490179.stgit@frogsfrogsfrogs>

From: Darrick J. Wong <djwong@kernel.org>

In the previous patch, we created a very basic quicksort implementation
for xfile arrays.  While the use of an alternate sorting algorithm to
avoid quicksort recursion on very small subsets reduces the runtime
modestly, we could do better than a load and store-heavy insertion sort,
particularly since each load and store requires a page mapping lookup in
the xfile.

For a small increase in kernel memory requirements, we could instead
bulk load the xfarray records into memory, use the kernel's existing
heapsort implementation to sort the records, and bulk store the memory
buffer back into the xfile.  On the author's computer, this reduces the
runtime by about 5% on a 500,000 element array.

Signed-off-by: Darrick J. Wong <djwong@kernel.org>
Reviewed-by: Kent Overstreet <kent.overstreet@linux.dev>
Reviewed-by: Dave Chinner <dchinner@redhat.com>
---
 fs/xfs/scrub/trace.h   |    5 +-
 fs/xfs/scrub/xfarray.c |  142 +++++++++---------------------------------------
 fs/xfs/scrub/xfarray.h |   12 +++-
 3 files changed, 39 insertions(+), 120 deletions(-)


diff --git a/fs/xfs/scrub/trace.h b/fs/xfs/scrub/trace.h
index 2fbee6389e2a0..1c9a31dc4e223 100644
--- a/fs/xfs/scrub/trace.h
+++ b/fs/xfs/scrub/trace.h
@@ -927,6 +927,7 @@ TRACE_EVENT(xfarray_sort_stats,
 		__field(unsigned long long, loads)
 		__field(unsigned long long, stores)
 		__field(unsigned long long, compares)
+		__field(unsigned long long, heapsorts)
 #endif
 		__field(unsigned int, max_stack_depth)
 		__field(unsigned int, max_stack_used)
@@ -938,6 +939,7 @@ TRACE_EVENT(xfarray_sort_stats,
 		__entry->loads = si->loads;
 		__entry->stores = si->stores;
 		__entry->compares = si->compares;
+		__entry->heapsorts = si->heapsorts;
 #endif
 		__entry->max_stack_depth = si->max_stack_depth;
 		__entry->max_stack_used = si->max_stack_used;
@@ -945,7 +947,7 @@ TRACE_EVENT(xfarray_sort_stats,
 	),
 	TP_printk(
 #ifdef DEBUG
-		  "xfino 0x%lx loads %llu stores %llu compares %llu stack_depth %u/%u error %d",
+		  "xfino 0x%lx loads %llu stores %llu compares %llu heapsorts %llu stack_depth %u/%u error %d",
 #else
 		  "xfino 0x%lx stack_depth %u/%u error %d",
 #endif
@@ -954,6 +956,7 @@ TRACE_EVENT(xfarray_sort_stats,
 		  __entry->loads,
 		  __entry->stores,
 		  __entry->compares,
+		  __entry->heapsorts,
 #endif
 		  __entry->max_stack_used,
 		  __entry->max_stack_depth,
diff --git a/fs/xfs/scrub/xfarray.c b/fs/xfs/scrub/xfarray.c
index 226488d85d6d6..2a0599f660d7b 100644
--- a/fs/xfs/scrub/xfarray.c
+++ b/fs/xfs/scrub/xfarray.c
@@ -374,10 +374,12 @@ xfarray_load_next(
 # define xfarray_sort_bump_loads(si)	do { (si)->loads++; } while (0)
 # define xfarray_sort_bump_stores(si)	do { (si)->stores++; } while (0)
 # define xfarray_sort_bump_compares(si)	do { (si)->compares++; } while (0)
+# define xfarray_sort_bump_heapsorts(si) do { (si)->heapsorts++; } while (0)
 #else
 # define xfarray_sort_bump_loads(si)
 # define xfarray_sort_bump_stores(si)
 # define xfarray_sort_bump_compares(si)
+# define xfarray_sort_bump_heapsorts(si)
 #endif /* DEBUG */
 
 /* Load an array element for sorting. */
@@ -440,15 +442,19 @@ xfarray_sortinfo_alloc(
 	/*
 	 * Tail-call recursion during the partitioning phase means that
 	 * quicksort will never recurse more than log2(nr) times.  We need one
-	 * extra level of stack to hold the initial parameters.
+	 * extra level of stack to hold the initial parameters.  In-memory
+	 * sort will always take care of the last few levels of recursion for
+	 * us, so we can reduce the stack depth by that much.
 	 */
-	max_stack_depth = ilog2(array->nr) + 1;
+	max_stack_depth = ilog2(array->nr) + 1 - (XFARRAY_ISORT_SHIFT - 1);
+	if (max_stack_depth < 1)
+		max_stack_depth = 1;
 
 	/* Each level of quicksort uses a lo and a hi index */
 	nr_bytes += max_stack_depth * sizeof(xfarray_idx_t) * 2;
 
-	/* One record for the pivot */
-	nr_bytes += array->obj_size;
+	/* Scratchpad for in-memory sort, or one record for the pivot */
+	nr_bytes += (XFARRAY_ISORT_NR * array->obj_size);
 
 	si = kvzalloc(nr_bytes, XCHK_GFP_FLAGS);
 	if (!si)
@@ -490,7 +496,7 @@ xfarray_sort_terminated(
 	return false;
 }
 
-/* Do we want an insertion sort? */
+/* Do we want an in-memory sort? */
 static inline bool
 xfarray_want_isort(
 	struct xfarray_sortinfo *si,
@@ -498,10 +504,10 @@ xfarray_want_isort(
 	xfarray_idx_t		end)
 {
 	/*
-	 * For array subsets smaller than 8 elements, it's slightly faster to
-	 * use insertion sort than quicksort's stack machine.
+	 * For array subsets that fit in the scratchpad, it's much faster to
+	 * use the kernel's heapsort than quicksort's stack machine.
 	 */
-	return (end - start) < 8;
+	return (end - start) < XFARRAY_ISORT_NR;
 }
 
 /* Return the scratch space within the sortinfo structure. */
@@ -511,10 +517,8 @@ static inline void *xfarray_sortinfo_isort_scratch(struct xfarray_sortinfo *si)
 }
 
 /*
- * Perform an insertion sort on a subset of the array.
- * Though insertion sort is an O(n^2) algorithm, for small set sizes it's
- * faster than quicksort's stack machine, so we let it take over for that.
- * This ought to be replaced with something more efficient.
+ * Sort a small number of array records using scratchpad memory.  The records
+ * need not be contiguous in the xfile's memory pages.
  */
 STATIC int
 xfarray_isort(
@@ -522,114 +526,23 @@ xfarray_isort(
 	xfarray_idx_t		lo,
 	xfarray_idx_t		hi)
 {
-	void			*a = xfarray_sortinfo_isort_scratch(si);
-	void			*b = xfarray_scratch(si->array);
-	xfarray_idx_t		tmp;
-	xfarray_idx_t		i;
-	xfarray_idx_t		run;
+	void			*scratch = xfarray_sortinfo_isort_scratch(si);
+	loff_t			lo_pos = xfarray_pos(si->array, lo);
+	loff_t			len = xfarray_pos(si->array, hi - lo + 1);
 	int			error;
 
 	trace_xfarray_isort(si, lo, hi);
 
-	/*
-	 * Move the smallest element in a[lo..hi] to a[lo].  This
-	 * simplifies the loop control logic below.
-	 */
-	tmp = lo;
-	error = xfarray_sort_load(si, tmp, b);
+	xfarray_sort_bump_loads(si);
+	error = xfile_obj_load(si->array->xfile, scratch, len, lo_pos);
 	if (error)
 		return error;
-	for (run = lo + 1; run <= hi; run++) {
-		/* if a[run] < a[tmp], tmp = run */
-		error = xfarray_sort_load(si, run, a);
-		if (error)
-			return error;
-		if (xfarray_sort_cmp(si, a, b) < 0) {
-			tmp = run;
-			memcpy(b, a, si->array->obj_size);
-		}
 
-		if (xfarray_sort_terminated(si, &error))
-			return error;
-	}
+	xfarray_sort_bump_heapsorts(si);
+	sort(scratch, hi - lo + 1, si->array->obj_size, si->cmp_fn, NULL);
 
-	/*
-	 * The smallest element is a[tmp]; swap with a[lo] if tmp != lo.
-	 * Recall that a[tmp] is already in *b.
-	 */
-	if (tmp != lo) {
-		error = xfarray_sort_load(si, lo, a);
-		if (error)
-			return error;
-		error = xfarray_sort_store(si, tmp, a);
-		if (error)
-			return error;
-		error = xfarray_sort_store(si, lo, b);
-		if (error)
-			return error;
-	}
-
-	/*
-	 * Perform an insertion sort on a[lo+1..hi].  We already made sure
-	 * that the smallest value in the original range is now in a[lo],
-	 * so the inner loop should never underflow.
-	 *
-	 * For each a[lo+2..hi], make sure it's in the correct position
-	 * with respect to the elements that came before it.
-	 */
-	for (run = lo + 2; run <= hi; run++) {
-		error = xfarray_sort_load(si, run, a);
-		if (error)
-			return error;
-
-		/*
-		 * Find the correct place for a[run] by walking leftwards
-		 * towards the start of the range until a[tmp] is no longer
-		 * greater than a[run].
-		 */
-		tmp = run - 1;
-		error = xfarray_sort_load(si, tmp, b);
-		if (error)
-			return error;
-		while (xfarray_sort_cmp(si, a, b) < 0) {
-			tmp--;
-			error = xfarray_sort_load(si, tmp, b);
-			if (error)
-				return error;
-
-			if (xfarray_sort_terminated(si, &error))
-				return error;
-		}
-		tmp++;
-
-		/*
-		 * If tmp != run, then a[tmp..run-1] are all less than a[run],
-		 * so right barrel roll a[tmp..run] to get this range in
-		 * sorted order.
-		 */
-		if (tmp == run)
-			continue;
-
-		for (i = run; i >= tmp; i--) {
-			error = xfarray_sort_load(si, i - 1, b);
-			if (error)
-				return error;
-			error = xfarray_sort_store(si, i, b);
-			if (error)
-				return error;
-
-			if (xfarray_sort_terminated(si, &error))
-				return error;
-		}
-		error = xfarray_sort_store(si, tmp, a);
-		if (error)
-			return error;
-
-		if (xfarray_sort_terminated(si, &error))
-			return error;
-	}
-
-	return 0;
+	xfarray_sort_bump_stores(si);
+	return xfile_obj_store(si->array->xfile, scratch, len, lo_pos);
 }
 
 /* Return a pointer to the xfarray pivot record within the sortinfo struct. */
@@ -783,9 +696,8 @@ xfarray_qsort_push(
  *    current stack frame.  This guarantees that we won't need more than
  *    log2(nr) stack space.
  *
- * 4. Use insertion sort for small sets since since insertion sort is faster
- *    for small, mostly sorted array segments.  In the author's experience,
- *    substituting insertion sort for arrays smaller than 8 elements yields
+ * 4. For small sets, load the records into the scratchpad and run heapsort on
+ *    them because that is very fast.  In the author's experience, this yields
  *    a ~10% reduction in runtime.
  */
 
diff --git a/fs/xfs/scrub/xfarray.h b/fs/xfs/scrub/xfarray.h
index 86c09897a4126..3661c98272cd5 100644
--- a/fs/xfs/scrub/xfarray.h
+++ b/fs/xfs/scrub/xfarray.h
@@ -58,6 +58,10 @@ int xfarray_load_next(struct xfarray *array, xfarray_idx_t *idx, void *rec);
 
 typedef cmp_func_t xfarray_cmp_fn;
 
+/* Perform an in-memory heapsort for small subsets. */
+#define XFARRAY_ISORT_SHIFT		(4)
+#define XFARRAY_ISORT_NR		(1U << XFARRAY_ISORT_SHIFT)
+
 struct xfarray_sortinfo {
 	struct xfarray		*array;
 
@@ -81,6 +85,7 @@ struct xfarray_sortinfo {
 	uint64_t		loads;
 	uint64_t		stores;
 	uint64_t		compares;
+	uint64_t		heapsorts;
 #endif
 
 	/*
@@ -99,11 +104,10 @@ struct xfarray_sortinfo {
 	 *
 	 * union {
 	 *
-	 * If for a given subset we decide to use an insertion sort, we use the
-	 * scratchpad record after the xfarray and a second scratchpad record
-	 * here to compare items:
+	 * If for a given subset we decide to use an in-memory sort, we use a
+	 * block of scratchpad records here to compare items:
 	 *
-	 * 	xfarray_rec_t	scratch;
+	 * 	xfarray_rec_t	scratch[ISORT_NR];
 	 *
 	 * Otherwise, we want to partition the records to partition the array.
 	 * We store the chosen pivot record here and use the xfarray scratchpad


  parent reply	other threads:[~2023-07-27 22:26 UTC|newest]

Thread overview: 90+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-07-27 22:11 [MEGAPATCHSET v26] xfs: online repair, part of part 1 Darrick J. Wong
2023-07-27 22:18 ` [PATCHSET v26.0 0/9] xfs: fix online repair block reaping Darrick J. Wong
2023-07-27 22:21   ` [PATCH 1/9] xfs: cull repair code that will never get used Darrick J. Wong
2023-07-27 22:21   ` [PATCH 2/9] xfs: move the post-repair block reaping code to a separate file Darrick J. Wong
2023-07-27 22:22   ` [PATCH 3/9] xfs: only invalidate blocks if we're going to free them Darrick J. Wong
2023-07-27 22:22   ` [PATCH 4/9] xfs: only allow reaping of per-AG blocks in xrep_reap_extents Darrick J. Wong
2023-07-27 22:22   ` [PATCH 5/9] xfs: use deferred frees to reap old btree blocks Darrick J. Wong
2023-07-27 22:22   ` [PATCH 6/9] xfs: rearrange xrep_reap_block to make future code flow easier Darrick J. Wong
2023-07-27 22:23   ` [PATCH 7/9] xfs: allow scanning ranges of the buffer cache for live buffers Darrick J. Wong
2023-07-27 22:23   ` [PATCH 8/9] xfs: reap large AG metadata extents when possible Darrick J. Wong
2023-07-27 22:23   ` [PATCH 9/9] xfs: use per-AG bitmaps to reap unused AG metadata blocks during repair Darrick J. Wong
2023-08-07  6:19   ` [PATCHSET v26.0 0/9] xfs: fix online repair block reaping Dave Chinner
2023-08-08  0:40     ` Darrick J. Wong
2023-08-08  5:17       ` Dave Chinner
2023-08-09 23:17         ` Darrick J. Wong
2023-07-27 22:18 ` [PATCHSET v26.0 0/6] xfs: prepare repair for bulk loading Darrick J. Wong
2023-07-27 22:24   ` [PATCH 1/6] xfs: force all buffers to be written during btree bulk load Darrick J. Wong
2023-07-27 22:24   ` [PATCH 2/6] xfs: implement block reservation accounting for btrees we're staging Darrick J. Wong
2023-08-07  6:58     ` Dave Chinner
2023-08-08  1:08       ` Darrick J. Wong
2023-07-27 22:24   ` [PATCH 3/6] xfs: log EFIs for all btree blocks being used to stage a btree Darrick J. Wong
2023-08-07  8:41     ` Dave Chinner
2023-08-08  0:54       ` Darrick J. Wong
2023-08-08  6:11         ` Dave Chinner
2023-08-09 23:52           ` Darrick J. Wong
2023-08-10 20:36             ` Darrick J. Wong
2023-09-08 23:34       ` Darrick J. Wong
2023-07-27 22:24   ` [PATCH 4/6] xfs: add debug knobs to control btree bulk load slack factors Darrick J. Wong
2023-07-27 22:25   ` [PATCH 5/6] xfs: move btree bulkload record initialization to ->get_record implementations Darrick J. Wong
2023-07-27 22:25   ` [PATCH 6/6] xfs: constrain dirty buffers while formatting a staged btree Darrick J. Wong
2023-07-27 22:19 ` [PATCHSET v26.0 0/7] xfs: stage repair information in pageable memory Darrick J. Wong
2023-07-27 22:25   ` [PATCH 1/7] xfs: create a big array data structure Darrick J. Wong
2023-07-28  3:10     ` Matthew Wilcox
2023-07-28  4:39       ` Darrick J. Wong
2023-07-27 22:25   ` [PATCH 2/7] xfs: enable sorting of xfile-backed arrays Darrick J. Wong
2023-07-27 22:26   ` Darrick J. Wong [this message]
2023-07-27 22:26   ` [PATCH 4/7] xfs: teach xfile to pass back direct-map pages to caller Darrick J. Wong
2023-07-27 22:26   ` [PATCH 5/7] xfs: speed up xfarray sort by sorting xfile page contents directly Darrick J. Wong
2023-07-27 22:26   ` [PATCH 6/7] xfs: cache pages used for xfarray quicksort convergence Darrick J. Wong
2023-07-27 22:27   ` [PATCH 7/7] xfs: improve xfarray quicksort pivot Darrick J. Wong
2023-07-27 22:19 ` [PATCHSET v26.0 0/2] xfs: add usage counters for scrub Darrick J. Wong
2023-07-27 22:27   ` [PATCH 1/2] xfs: create scaffolding for creating debugfs entries Darrick J. Wong
2023-07-27 22:27   ` [PATCH 2/2] xfs: track usage statistics of online fsck Darrick J. Wong
2023-08-08  7:09   ` [PATCHSET v26.0 0/2] xfs: add usage counters for scrub Dave Chinner
2023-07-27 22:19 ` [PATCHSET v26.0 0/4] xfs: online scrubbing of realtime summary files Darrick J. Wong
2023-07-27 22:27   ` [PATCH 1/4] xfs: get our own reference to inodes that we want to scrub Darrick J. Wong
2023-07-27 22:28   ` [PATCH 2/4] xfs: wrap ilock/iunlock operations on sc->ip Darrick J. Wong
2023-07-27 22:28   ` [PATCH 3/4] xfs: move the realtime summary file scrubber to a separate source file Darrick J. Wong
2023-07-27 22:28   ` [PATCH 4/4] xfs: implement online scrubbing of rtsummary info Darrick J. Wong
2023-07-27 22:19 ` [PATCHSET v26.0 0/2] xfs: miscellaneous repair tweaks Darrick J. Wong
2023-07-27 22:28   ` [PATCH 1/2] xfs: always rescan allegedly healthy per-ag metadata after repair Darrick J. Wong
2023-07-27 22:29   ` [PATCH 2/2] xfs: allow the user to cancel repairs before we start writing Darrick J. Wong
2023-07-27 22:20 ` [PATCHSET v26.0 0/2] xfs: force rebuilding of metadata Darrick J. Wong
2023-07-27 22:29   ` [PATCH 1/2] xfs: don't complain about unfixed metadata when repairs were injected Darrick J. Wong
2023-07-27 22:29   ` [PATCH 2/2] xfs: allow userspace to rebuild metadata structures Darrick J. Wong
2023-07-27 22:20 ` [PATCHSET v26.0 0/2] xfs: fixes to the AGFL repair code Darrick J. Wong
2023-07-27 22:30   ` [PATCH 1/2] xfs: clear pagf_agflreset when repairing the AGFL Darrick J. Wong
2023-07-27 22:30   ` [PATCH 2/2] xfs: fix agf_fllast when repairing an empty AGFL Darrick J. Wong
2023-08-08  7:10     ` Dave Chinner
2023-07-27 22:20 ` [PATCHSET v26.0 0/5] xfs: online repair of AG btrees Darrick J. Wong
2023-07-27 22:30   ` [PATCH 1/5] xfs: repair free space btrees Darrick J. Wong
2023-07-27 22:30   ` [PATCH 2/5] xfs: hide xfs_inode_is_allocated in scrub common code Darrick J. Wong
2023-08-08  7:13     ` Dave Chinner
2023-07-27 22:31   ` [PATCH 3/5] xfs: rewrite xchk_inode_is_allocated to work properly Darrick J. Wong
2023-08-08  7:14     ` Dave Chinner
2023-07-27 22:31   ` [PATCH 4/5] xfs: repair inode btrees Darrick J. Wong
2023-07-27 22:31   ` [PATCH 5/5] xfs: repair refcount btrees Darrick J. Wong
2023-07-27 22:20 ` [PATCHSET v26.0 0/2] xfs: fixes for the block mapping checker Darrick J. Wong
2023-07-27 22:31   ` [PATCH 1/2] xfs: simplify returns in xchk_bmap Darrick J. Wong
2023-07-27 22:32   ` [PATCH 2/2] xfs: don't check reflink iflag state when checking cow fork Darrick J. Wong
2023-08-08  7:16   ` [PATCHSET v26.0 0/2] xfs: fixes for the block mapping checker Dave Chinner
2023-07-27 22:21 ` [PATCHSET v26.0 0/6] xfs: online repair of inodes and forks Darrick J. Wong
2023-07-27 22:32   ` [PATCH 1/6] xfs: disable online repair quota helpers when quota not enabled Darrick J. Wong
2023-07-27 22:32   ` [PATCH 2/6] xfs: try to attach dquots to files before repairing them Darrick J. Wong
2023-07-27 22:32   ` [PATCH 3/6] xfs: repair inode records Darrick J. Wong
2023-08-09  8:42     ` Dave Chinner
2023-08-10  0:43       ` Darrick J. Wong
2023-07-27 22:33   ` [PATCH 4/6] xfs: zap broken inode forks Darrick J. Wong
2023-07-27 22:33   ` [PATCH 5/6] xfs: abort directory parent scrub scans if we encounter a zapped directory Darrick J. Wong
2023-07-27 22:33   ` [PATCH 6/6] xfs: repair obviously broken inode modes Darrick J. Wong
2023-08-09  9:44   ` [PATCHSET v26.0 0/6] xfs: online repair of inodes and forks Dave Chinner
2023-08-10  0:45     ` Darrick J. Wong
2023-07-27 22:21 ` [PATCHSET v26.0 0/5] xfs: online repair of file fork mappings Darrick J. Wong
2023-07-27 22:33   ` [PATCH 1/5] xfs: reintroduce reaping of file metadata blocks to xrep_reap_extents Darrick J. Wong
2023-07-27 22:34   ` [PATCH 2/5] xfs: repair inode fork block mapping data structures Darrick J. Wong
2023-07-27 22:34   ` [PATCH 3/5] xfs: refactor repair forcing tests into a repair.c helper Darrick J. Wong
2023-07-27 22:34   ` [PATCH 4/5] xfs: create a ranged query function for refcount btrees Darrick J. Wong
2023-07-27 22:34   ` [PATCH 5/5] xfs: repair problems in CoW forks Darrick J. Wong
  -- strict thread matches above, loose matches on Subject: below --
2023-05-26  0:28 [PATCHSET v25.0 0/7] xfs: stage repair information in pageable memory Darrick J. Wong
2023-05-26  0:47 ` [PATCH 3/7] xfs: convert xfarray insertion sort to heapsort using scratchpad memory Darrick J. Wong
2022-12-30 22:12 [PATCHSET v24.0 0/7] xfs: stage repair information in pageable memory Darrick J. Wong
2022-12-30 22:12 ` [PATCH 3/7] xfs: convert xfarray insertion sort to heapsort using scratchpad memory Darrick J. Wong

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